BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A05SP1|AL429317
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1241 1892 0.0
>3x_Contig1241
Length = 5349
Score = 1892 bits (951), Expect = 0.0
Identities = 966/973 (99%), Gaps = 1/973 (0%)
Strand = Plus / Minus
Query: 1 tatcttttccgcaagcattaattaattcgtttatcagttgatctgaaagggtaaccgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3097 tatcttttccgcaagcattaattaattcgtttatcagttgatctgaaagggtaaccgtat 3038
Query: 61 tgagcatttttgctatagtattgaaacagaaattgtatatctgatatttgaatcgcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3037 tgagcatttttgctatagtattgaaacagaaattgtatatctgatatttgaatcgcacat 2978
Query: 121 aaaatatagaccattcagagtttttatcctccaatgattgtmatattgamataacattgt 180
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 2977 aaaatatagaccattcagagtttttatcctccaatgattgtaatattgaaataacattgt 2918
Query: 181 ttataatatcatatgttttgaattgagtttcaatcatcgagatatcgaggtcatttaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2917 ttataatatcatatgttttgaattgagtttcaatcatcgagatatcgaggtcatttaatg 2858
Query: 241 gcaataaaaccatagaaaaatttaaaggaatcagttggtagaattttggtaaatgcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2857 gcaataaaaccatagaaaaatttaaaggaatcagttggtagaattttggtaaatgcaaaa 2798
Query: 301 ggggtttgaaggctttggggttagttcttatcaacgacactattgcagattggaccttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2797 ggggtttgaaggctttggggttagttcttatcaacgacactattgcagattggaccttct 2738
Query: 361 cttcatcgccgattttggtatccgataataaatacttttgtagtaaatccaatcccagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2737 cttcatcgccgattttggtatccgataataaatacttttgtagtaaatccaatcccagtt 2678
Query: 421 tagggtccttggataaaatgacatgaagaggttctggttcaacctcttctctcttcatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 tagggtccttggataaaatgacatgaagaggttctggttcaacctcttctctcttcatgt 2618
Query: 481 agcgattcaacaacggatttgtttgtgaatttgtcaactcacttgttaaatcaatattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2617 agcgattcaacaacggatttgtttgtgaatttgtcaactcacttgttaaatcaatattca 2558
Query: 541 tatcatgatccggaggtgtacgtmacgatcttttgctaaacgattgcgtcccttgagcta 600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2557 tatcatgatccggaggtgtacgtaacgatcttttgctaaacgattgcgtcccttgagcta 2498
Query: 601 aatccgttaatgatctttttattgamgatctaggtaaatgggacgattgagtcggagcag 660
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2497 aatccgttaatgatctttttattgacgatctaggtaaatgggacgattgagtcggagcag 2438
Query: 661 cataactggggaatcgttttggcagtaagcttgaccttcttgacgattcctttgattgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2437 cataactggggaatcgttttggcagtaagcttgaccttcttgacgattcctttgattgag 2378
Query: 721 gagggatagctgcctcataattgatatccaaatgggtaggaatactattttctagagctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2377 gagggatagctgcctcataattgatatccaaatgggtaggaatactattttctagagctc 2318
Query: 781 ttttgatctgaggttggaaaaggtttagcattttcttgccactcattggtgagactttga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2317 ttttgatctgaggttggaaaaggtttagcattttcttgccactcattggtgagactttga 2258
Query: 841 accagtaccagaaatgtaattctcatggactcccttatggttgtctgagcgtctgttaac 900
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 accagtaccag-aatgtaattctcatggactcccttatggttgtctgagcgtctgttaac 2199
Query: 901 cctttttgcaaccattcctcgacgtagacatgatgttgcgatatcaacctcttatgggam 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2198 cctttttgcaaccattcctcgacgtagacatgatgttgcgatatcaacctcttatggaac 2139
Query: 961 cttactattagaa 973
|||||||||||||
Sbjct: 2138 cttactattagaa 2126
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7282
Number of Sequences: 1807
Number of extensions: 7282
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)